Main Window — Proteins Toolbar

This toolbar provides access to tools for working with proteins.

Quick Torsion
Rotate part of a structure around a bond. Pick the bond in the Workspace, and drag with the left mouse button to adjust the torsional angle.
Sculpt
Menu equivalent: Tools → Structure Sculpting.
Perform "sculpting"—move the selected atoms and run a limited force-field minimization of a region around the moved atoms. The minimization is restarted each time you move an atom. See the Local Transformations topic for more information.
Protein Reports
Opens the Protein Reports panel so you can view information about the protein structure.
Ramachandran
Opens the Ramachandran Plot panel so you can view a Ramachandran plot of the protein dihedrals.
Crystal Mates
View all or part of symmetry-related molecules that are within van der Waals contact of the asymmetric unit. If you click and hold, a menu is displayed, from which you can choose a distance from the displayed structure within which the crystal mates will be displayed.
Regularize
Perform a short, force-field coordinate minimization for the selected residues.
Partial Occ
Set the occupancies for the selected atoms in the Partial Occupancy dialog box .

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Last updated: 19 Jun 2014